Datasets

Datasets#

mantispy.ds serves fifteen datasets from the Cell Painting Gallery [Weisbart et al., 2024], each downloaded from files pinned by sha256. The overview covers all fifteen, and four have pages of their own: where each comes from, how every column mantispy adds was derived, and what the data looks like.

Each rehosted file is built by python scripts/build_dataset.py <name>, which loads the dataset from its pinned upstream files, writes it as h5ad, and prints its sha256 and a fingerprint of its contents. A rebuild is checked against the fingerprint, since another anndata or h5py release can write the same object as different bytes.