mantispy.pl.image_qc

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mantispy.pl.image_qc#

mantispy.pl.image_qc(adata, ax=None)#

Image quality score per image, with the flagged images marked.

Parameters:

  • adata (AnnData) – Object image_qc() has run on.

  • ax (Axes | None (default: None)) – Axes to draw on, or None for a new figure.

Return type:

Axes

Returns:

The axes drawn on, with one point per image in the order of the table and the flagged images drawn larger and in crimson.

Raises:

KeyError – uns["mantispy"] holds no image_qc table.

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