mantispy.ds.chroma

mantispy.ds.chroma(cache_dir=None, **kwargs)

Alternative dyes, 3,455 wells across eight channels.

cpg0029-chroma-pilot, which images more channels than the five of the standard protocol. One plate barcode appears at several timepoints, so the observations are not indexed by plate and well.

Parameters:

• cache_dir (str | Path | None (default: None)) – Where to keep the download. Defaults to mantispy.settings.cache_dir.

• kwargs (Any) – Passed to mantispy.io.read_profiles().

Return type:

AnnData

Returns:

Wells by features, with Metadata_CellCount and Metadata_SiteCount.