mantispy.get.var_df

mantispy.get.var_df(adata, keys=(), varm_keys=(), *, layer=None)

Return values for observations in adata.

Return type:

DataFrame

Params

adata

AnnData object to get values from.

keys

Keys from either .obs_names, or .var.columns.

varm_keys

Tuples of (key from varm, column index of varm[key]).

layer

Layer of adata to use as expression values.

Returns

A dataframe with adata.var_names as index, and values specified by keys and varm_keys.