mantispy.get.controls

mantispy.get.controls(adata, kind='negcon')

Boolean mask of control rows.

Parameters:

• adata (AnnData) – Object to read.

• kind (str (default: 'negcon')) – "negcon" reads Metadata_Control; "poscon" reads Metadata_Control_Type == "poscon" and is all-False when that column is absent.

Return type:

ndarray

Returns:

A boolean mask over obs, true on the control rows.

Raises:

• ValueError – kind is neither "negcon" nor "poscon", or Metadata_Control has missing values.

• KeyError – "negcon" was asked for and obs has no Metadata_Control column.

• TypeError – Metadata_Control is not boolean, so it would select every row.