mantispy.pl.sets_heatmap

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mantispy.pl.sets_heatmap#

mantispy.pl.sets_heatmap(adata, groupby, score_key='score_ulm', top=30, ax=None)#

Mean enrichment score per group per feature set.

Parameters:

  • adata (AnnData) – Object enrich() has scored, holding the per-row scores in obsm.

  • groupby (str) – obs column whose groups become the rows.

  • score_key (str (default: 'score_ulm')) – obsm key holding those scores, named after the method that wrote them.

  • top (int (default: 30)) – How many feature sets to draw, taken by their largest absolute mean score.

  • ax (Axes | None (default: None)) – Axes to draw on, or None for a new figure.

Return type:

Axes

Returns:

The axes drawn on, holding groups against feature sets, the sets it kept sorted by name, on a diverging scale.

Raises:

KeyError – obsm holds nothing under score_key.

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